BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F12LP1|AL429264
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig184 663 0.0
>3x_Contig184
Length = 1475
Score = 663 bits (334), Expect = 0.0
Identities = 337/338 (99%)
Strand = Plus / Minus
Query: 1 acccataaccaaattttaaagtttagacaatactacaatgaaaaagtctatgacactcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acccataaccaaattttaaagtttagacaatactacaatgaaaaagtctatgacactcac 279
Query: 61 ggaaagccattaattagaggttcgttggatccacttgtttctccttgtaacaaatggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggaaagccattaattagaggttcgttggatccacttgtttctccttgtaacaaatggtac 219
Query: 121 gaatctttaatcaattcttctttccctgagggtaaagaagttcctacaaatggattctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaatctttaatcaattcttctttccctgagggtaaagaagttcctacaaatggattctct 159
Query: 181 aatgaattggataggtcatttgccttaactttcaatgctattcaaagagctgcttctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 aatgaattggataggtcatttgccttaactttcaatgctattcaaagagctgcttctgtt 99
Query: 241 ttcaataaaagatctaaggagactattttggctccatgcaattacgttaaacatgttaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ttcaataaaagatctaaggagactattttggctccatgcaattacgttaaacatgttaac 39
Query: 301 gatgtcttgaacgtaaatttggacaaccaggaggattt 338
|||||||||||||||||||| |||||||||||||||||
Sbjct: 38 gatgtcttgaacgtaaattttgacaaccaggaggattt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,203
Number of Sequences: 1807
Number of extensions: 11203
Number of successful extensions: 243
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)